Brain Imaging Data Structure
 | |
| Abbreviation | BIDS |
|---|---|
| Status | Published |
| Year started | 2014 |
| Latest version | 1.2.0 March 2019 |
| Domain | Neuroimaging |
| License | CC-BY 4.0 |
| Website | bids |
The Brain Imaging Data Structure (BIDS) is a standard for organizing, annotating, and describing data collected during neuroimaging experiments. It is based on a formalized file/folder structure and JSON based metadata files with controlled vocabulary.[1] This standard has been adopted by a multitude of labs around the world as well as databases such as OpenNeuro, SchizConnect, Developing Human Connectome Project, and FCP-INDI, and is seeing uptake in an increasing number of studies.[2][3][4]
While originally specified for MRI data, BIDS has been extended to several other imaging modalities such as MEG[5], EEG[6], and intracranial EEG[7].
References
- ^ Krzysztof J; et al. "The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments". Scientific Data. 3. doi:10.1038/sdata.2016.44. PMID 27326542.
- ^ Poldrack, R. A., et al. "A phenome-wide examination of neural and cognitive function." Scientific data 3 (2016): 160110.
- ^ Bigdely-Shamlo, Nima, Scott Makeig, and Kay A. Robbins. "Preparing laboratory and real-world EEG data for large-scale analysis: a containerized approach." Frontiers in neuroinformatics 10 (2016): 7.
- ^ Nichols, Thomas E., et al. "Best practices in data analysis and sharing in neuroimaging using MRI." Nature neuroscience 20.3 (2017): 299.
- ^ Niso, Guiomar; Gorgolewski, Krzysztof J.; Bock, Elizabeth; Brooks, Teon L.; Flandin, Guillaume; Gramfort, Alexandre; Henson, Richard N.; Jas, Mainak; Litvak, Vladimir; T. Moreau, Jeremy; Oostenveld, Robert; Schoffelen, Jan-Mathijs; Tadel, Francois; Wexler, Joseph; Baillet, Sylvain (19 June 2018). "MEG-BIDS, the brain imaging data structure extended to magnetoencephalography". Scientific Data. 5: 180110. doi:10.1038/sdata.2018.110.
- ^ Pernet, Cyril R.; Appelhoff, Stefan; Gorgolewski, Krzysztof J.; Flandin, Guillaume; Phillips, Christophe; Delorme, Arnaud; Oostenveld, Robert (2019-12). "EEG-BIDS, an extension to the brain imaging data structure for electroencephalography". Scientific Data. 6 (1). doi:10.1038/s41597-019-0104-8. ISSN 2052-4463.
{{cite journal}}: Check date values in:|date=(help) - ^ Holdgraf, Christopher; Appelhoff, Stefan; Bickel, Stephan; Bouchard, Kristofer; D’Ambrosio, Sasha; David, Olivier; Devinsky, Orrin; Dichter, Benjamin; Flinker, Adeen (2019-12). "iEEG-BIDS, extending the Brain Imaging Data Structure specification to human intracranial electrophysiology". Scientific Data. 6 (1). doi:10.1038/s41597-019-0105-7. ISSN 2052-4463.
{{cite journal}}: Check date values in:|date=(help)
External links
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