local p = {}
function p.fmttimestamp(frame)
local ts = frame.args[1] --20190201223349
local y = string.sub(ts,1,4)
local mo = string.sub(ts,5,6)
local d = string.sub(ts,7,8)
local h = string.sub(ts,9,10)
local mi = string.sub(ts,11,12)
local s = string.sub(ts,13,14)
return y..'-'..mo..'-'..d..'T'..h..':'..mi..':'..s --ISO 8601 format without time zone designator
end
function p.istaxon(frame)
-- climbs the taxon tree until a description is found
-- prefix 'c' = child, 'p' = parent
-- output: [[cSitelink or cQID]] [[cQID]] <cI/O> (cI/O lbl) <cTaxonQID> <cTaxon QID label> [[pQID|pDescription]]: <pDescription's animal type>
-- ex: [[Orthalicus nobilis]] [[d:Q49525664]] Q16521 (taxon) Q7432 species [[d:Q7104378|genus of molluscs]]: mollusc
local resolveEntity = require( 'Module:ResolveEntityId' )
local title = frame.args[1]
local qid = resolveEntity._id(title)
local item = mw.wikibase.getEntity(qid)
local acceptableInstanceOf = {
['Q16521'] = 'taxon',
['Q310890'] = 'monotypic taxon',
['Q2568288'] = 'ichnotaxon',
['Q23038290'] = 'fossil taxon',
['Q47487597'] = 'monotypic fossil taxon',
}
local allowNonTaxons = false --if false (default), display '(not a taxon)';
local otherInstanceOf = { --if true, allow clades, etc., as named in otherInstanceOf{}
['Q713623'] = 'clade',
-- ['Q4886'] = 'cultivar', --kind of a mess
}
local tab = ' '
if item then
--find child's rank
local childRank, childRankLabel, species = nil
local childRankState = item:getBestStatements('P105')[1] --taxon rank
if childRankState then
if childRankState.mainsnak.datavalue then
childRank = childRankState.mainsnak.datavalue.value.id
childRankLabel = mw.wikibase.getLabel(childRank)
local speciesRanks = {
['Q7432'] = 'species',
['Q68947'] = 'subspecies',
['Q4886'] = 'cultivar',
['Q279749'] = 'form',
['Q630771'] = 'subvariety',
['Q767728'] = 'variety',
--these should all be plural (added here for reference):
-- ['Q3025161'] = 'series',
-- ['Q3181348'] = 'section',
}
if speciesRanks[childRank] then
species = 'species' --used later as a boolean
end
else
childRank = 'missing taxon rank value'
childRankLabel = '-'
end
end
--find parent's description; if nil, search grandparent, etc., etc.
local ancestorItem = item --initialize to child
local bothDescriptionsFmtd = tab..tab --parent's raw descrip + child's new suggested descrip
local parentDescription = nil
local newChildDescription = nil
local oldChildDescription = mw.wikibase.getDescription(parentId) --different output if nil vs present
if oldChildDescription == nil then
while bothDescriptionsFmtd == tab..tab do
local parentState = ancestorItem:getBestStatements('P171')[1] --parent taxon
if parentState then
local parentId = parentState.mainsnak.datavalue.value.id
if parentId then
parentDescription = mw.wikibase.getDescription(parentId)
if parentDescription then
local trim = mw.ustring.gsub(parentDescription, '^[%w%s%(%)%-,]-%s+of%s+', '') --trim to first ' of ' to remove taxon rank/monotypic
if species then
--remove 's' semi-liberally
trim = mw.ustring.gsub(trim, '^([%w]+[^s])s([, ])', '%1%2') --birdS that ...; plantS, guava
trim = mw.ustring.gsub(trim, '^([a-z]+[^s])s$', '%1') --birdS
trim = mw.ustring.gsub(trim, '([^a-zA-Z][a-z]+[^s])s$', '%1') --song and dance birdS
trim = mw.ustring.gsub(trim, '^([%w%-]+ [a-z]+[^s])s([, ])', '%1%2') --song birdS in ...
trim = mw.ustring.gsub(trim, 's %(fossil', ' (fossil') --birdS (fossil)
-- trim = mw.ustring.gsub(trim, 's %(', ' (') --turn off if too liberal
trim = mw.ustring.gsub(trim, 's of ', ' of ') --triasic birdS of the family...
trim = mw.ustring.gsub(trim, 's in the ', ' in the ') --triasic birdS in the family...
--fix special cases
trim = mw.ustring.gsub(trim, 'algae', 'alga')
trim = mw.ustring.gsub(trim, 'cactu(%f[\0, ])', 'cactus%1') --only way to combine rules with Lua's shitty regex; %f doesn't recognize [^s]...
trim = mw.ustring.gsub(trim, 'cactuse(%f[\0, ])', 'cactus%1')
trim = mw.ustring.gsub(trim, 'carnivorou(%f[\0, ])', 'carnivorous%1')
trim = mw.ustring.gsub(trim, 'countrie(%f[\0, ])', 'countries%1')
trim = mw.ustring.gsub(trim, 'citru(%f[\0, ])', 'citrus%1')
trim = mw.ustring.gsub(trim, 'crocu(%f[\0, ])', 'crocus%1')
trim = mw.ustring.gsub(trim, 'deciduou(%f[\0, ])', 'deciduous%1')
trim = mw.ustring.gsub(trim, '[eE]delweis(%f[\0, ])', 'edelweiss%1')
trim = mw.ustring.gsub(trim, 'fishe(%f[\0, ])', 'fish%1')
trim = mw.ustring.gsub(trim, 'flightles(%f[\0, ])', 'flightless%1')
trim = mw.ustring.gsub(trim, 'fung[iu](%f[\0, ])', 'fungus%1')
trim = mw.ustring.gsub(trim, '[gG]enu(%f[\0, ])', 'genus%1')
trim = mw.ustring.gsub(trim, '[gG]ras(%f[\0, ])', 'grass%1')
trim = mw.ustring.gsub(trim, '[gG]rasse(%f[\0, ])', 'grass%1')
trim = mw.ustring.gsub(trim, 'herbaceou(%f[\0, ])', 'herbaceous%1')
trim = mw.ustring.gsub(trim, 'herbivorou(%f[\0, ])', 'herbivorous%1')
trim = mw.ustring.gsub(trim, '[iI]ri(%f[\0, ])', 'iris%1')
trim = mw.ustring.gsub(trim, 'loache(%f[\0, ])', 'loach%1')
trim = mw.ustring.gsub(trim, 'mos(%f[\0, ])', 'moss%1')
trim = mw.ustring.gsub(trim, 'mosse(%f[\0, ])', 'moss%1')
trim = mw.ustring.gsub(trim, '[sS]pecie(%f[\0, ])', 'species%1')
trim = mw.ustring.gsub(trim, 'venomou(%f[\0, ])', 'venomous%1')
trim = mw.ustring.gsub(trim, 'viruse(%f[\0, ])', 'virus%1')
end
if trim == parentDescription then trim = '' end --nothing changed, so no need to duplicate it
newChildDescription = trim --used 'trim' just b/c it's shorter
bothDescriptionsFmtd = tab..'[[d:'..parentId..'|'..parentDescription..']]:'..tab..newChildDescription
else
ancestorItem = mw.wikibase.getEntity(parentId)
end
else
bothDescriptionFmtds = tab..'parent missing ID??'..tab --probably not a valid falure mode, but jic...
end
else
bothDescriptionsFmtd = tab..'no parent taxon/P171'..tab
end
end --while
end --if oldChildDescription == nil
--test child for instance of: taxon
local j = 0
for i, instanceOfState in pairs ( item:getBestStatements('P31') ) do --child's instance of
local instanceOf = instanceOfState.mainsnak.datavalue.value.id
if acceptableInstanceOf[instanceOf] or
(acceptableInstanceOf[instanceOf] == nil and otherInstanceOf[instanceOf] and allowNonTaxons == true) then
--extinct/fossil handling in description
local instanceOfLabel = mw.wikibase.getLabel(instanceOf)
if oldChildDescription == nil then
--only append ' (fossil)', when needed, to items missing descrip;
--retroactively making existing descriptions match their 'instance of taxon rank' is a different/much larger job
if instanceOfLabel == 'fossil taxon' or instanceOfLabel == 'monotypic fossil taxon' then
local childSaysFossil = string.match(newChildDescription, 'extinct') or
string.match(newChildDescription, 'dinosaur') or
string.match(newChildDescription, 'fossil')
if childSaysFossil == nil then
newChildDescription = newChildDescription..' (fossil)' --housekeeping
bothDescriptionsFmtd = bothDescriptionsFmtd..' (fossil)' --goes to output
end
end
else
bothDescriptionsFmtd = tab..'child has description: '..oldChildDescription..tab
end
--output for successful items
local title_qid = '[['..title..']]'..tab..'[[d:'..qid..'|'..qid..']]'
if childRank == nil then childRank = 'UNRANKED' end
if childRankLabel == nil then
if childRank == 'UNRANKED' then childRankLabel = 'UNRANKED'
else childRankLabel = 'MISSING LABEL' end
end
local cRank_cLabel_pDescrip = childRank..tab..childRankLabel..bothDescriptionsFmtd
if instanceOfLabel == 'taxon' then
return title_qid..tab..instanceOf..tab..'('..instanceOfLabel..')'..tab..cRank_cLabel_pDescrip
elseif instanceOfLabel == 'monotypic taxon' then --force 'Q16521' output (taxon)
return title_qid..tab..'Q16521'..tab..'('..instanceOfLabel..')'..tab..cRank_cLabel_pDescrip
elseif instanceOfLabel == 'monotypic fossil taxon' then --force 'Q23038290' output (fossil taxon)
return title_qid..tab..'Q23038290'..tab..'('..instanceOfLabel..')'..tab..cRank_cLabel_pDescrip
else --ichno or polytypic fossil
return title_qid..tab..instanceOf..tab..'('..instanceOfLabel..')'..tab..cRank_cLabel_pDescrip
end
end
j = i
end --for
--output for failed items
if j > 0 then
return '[['..title..']]'..tab..'[[d:'..qid..'|'..qid..']]'..tab..'instanceOf:'..tab..'(not a taxon)'
else
return '[['..title..']]'..tab..'[[d:'..qid..'|'..qid..']]'..tab..'instanceOf:'..tab..'(not a taxon? no instanceOf)'
end
else
--output for failed items
if qid then
return '[['..title..']]'..tab..'[[d:'..qid..'|'..qid..']]'..tab..'item'..tab..'(not a taxon? item lookup failed)'
else
return '[['..title.. ']]'..tab..''..'Q#'..tab..'not on Wikidata OR no sitelink'
end
end
end
function p.getTaxonRank(frame)
local resolveEntity = require( 'Module:ResolveEntityId' )
local title = frame.args[1]
local qid = resolveEntity._id(title)
local item = mw.wikibase.getEntity(qid)
local taxonRanks = {
['Q7432'] = 'species',
['Q34740'] = 'genus',
['Q35409'] = 'family',
['Q36602'] = 'order',
['Q37517'] = 'class',
['Q38348'] = 'phylum',
['Q2007442'] = 'infraclass',
['Q2136103'] = 'superfamily',
['Q227936'] = 'tribe',
['Q2455704'] = 'subfamily',
['Q2889003'] = 'infraorder',
['Q3238261'] = 'subgenus',
['Q5867051'] = 'subclass',
['Q5867959'] = 'suborder',
['Q5868144'] = 'superorder',
['Q68947'] = 'subspecies',
}
if qid then
if item then
local tab = '	'
local rankState = item:getBestStatements('P105')[1] --taxon rank
if rankState then
local rank = rankState.mainsnak.datavalue.value.id
if rank then
if taxonRanks[rank] then return taxonRanks[rank]
else return rank end
else return 'No rank found' end
else
return 'rankState not found'
end
else
return 'Item not found'
end
else
return 'QID not found'
end
end
return p
