Higher-order singular value decomposition
In multilinear algebra, there does not exist a general decomposition method for multi-way arrays (also known as N-arrays, higher-order arrays, or data-tensors) with all the properties of a matrix singular value decomposition (SVD). A matrix SVD simultaneously computes
- (a) a rank-R decomposition and
- (b) the orthonormal row/column matrices.
These two properties can be captured separately by two different decompositions for multi-way arrays.
Property (a) is extended to higher order by a class of closely related constructions known collectively as CP decomposition (named after the two most popular and general variants, CANDECOMP and PARAFAC). Such decompositions represent a tensor as the sum of the n-fold outer products of rank-1 tensors, where n is the dimension of the tensor indices.
Property (b) is extended to higher order by a class of methods known variably as Tucker3, N-mode SVD, and N-mode principal component analysis (PCA). (This article will use the general term "Tucker decomposition".) These methods compute the orthonormal spaces associated with the different axes (or modes) of a tensor. The Tucker decomposition is also used in multilinear subspace learning as multilinear principal component analysis. This terminology was coined by P. Kroonenberg in the 1980s, but it was later called multilinear SVD and HOSVD (higher-order SVD) by L. De Lathauwer.
Historically, much of the interest in higher-order SVDs was driven by the need to analyze empirical data, especially in psychometrics and chemometrics. As such, many of the methods have been independently invented several times, often with subtle variations, leading to a confusing literature. Abstract and general mathematical theorems are rare (though see Kruskal[1] with regard to the CP decomposition); instead, the methods are often designed for analyzing specific data types. The 2008 review article by Kolda and Bader[2] provides a compact summary of the history of these decompositions, and many references for further reading.
The concept of HOSVD was carried over to functions by Baranyi and Yam via the TP model transformation [3] .[4] This extension led to the definition of the HOSVD based canonical form of tensor product functions and Linear Parameter Varying system models [5] and to convex hull manipulation based control optimization theory, see TP model transformation in control theories.
CP decomposition
Definition
A CP decomposition of an N-way array X, with elements , is
where denotes the tensor product. The R tensors (known as simple tensors, rank-1 tensors, dyads, or, in quantum mechanics, product states) are constructed from the rN vectors . With indices, this is
where is the i-th element of the vector , etc.
Tucker decomposition
History
In 1966, L. Tucker proposed a decomposition method for three-way arrays (referred to as a 3-mode "tensors") as a multidimensional extension of factor analysis.[6] This decomposition was further developed in the 1980s by P. Kroonenberg, who coined the terms Tucker3, Tucker3ALS (an alternating least squares dimensionality reduction algorithm), 3-Mode SVD, and 3-Mode PCA.[7] In the intervening years, several authors developed the decomposition for N-way arrays. Most recently, this work was treated in an elegant fashion and introduced to the SIAM community by L. De Lathauwer et al. who referred to the decomposition as an N-way SVD, multilinear SVD and HOSVD.[8]
Definitions
Let the SVD of a real matrix be , then it can be written in an elementwise form as
and give, in a certain sense optimal, orthonormal basis for the column and row space, is diagonal with decreasing elements. The higher-order singular value decomposition (HOSVD) can be defined by the multidimensional generalization of this concept:
where the matrices and the core tensor should satisfy certain requirements (similar ones to the matrix SVD), namely
- Each is an orthogonal matrix.
- Two subtensors of the core tensor are orthogonal i.e., if .
- The subtensors in the core tensor are ordered according to their Frobenius norm, i.e. for n = 1, ..., N.
Notation:
Algorithm
The HOSVD can be built from several SVDs, as follows:[8]
- Given a tensor , construct the mode-k flattening . That is, the matrix that corresponds to .
- Compute the singular value decomposition , and store the left singular vectors .
- The core tensor is then the projection of onto the tensor basis formed by the factor matrices , i.e.,
Applications
Main applications are extracting relevant information from multi-way arrays. Used in factor analysis, face recognition (TensorFaces), human motion analysis and synthesis.
The HOSVD has been successfully applied to signal processing and big data, e.g., in genomic signal processing.[9][10][11] These applications also inspired a higher-order generalized singular value decomposition (HO GSVD).[12]
A combination of HOSVD and SVD also has been applied for real time event detection from complex data streams (multivariate data with space and time dimensions) in Disease surveillance.[13]
It is also used in tensor product model transformation-based controller design.[3][4] In multilinear subspace learning,[14] it is modified to multilinear principal component analysis[15] for gait recognition.
In machine learning, the CP-decomposition is the central ingredient in learning probabilistic latent variables models via the technique of moment-matching. For example, in topic modeling[16], the empirical third moment corresponds to the co-occurence of words in a document. Then the eigenvalues of this empirical moment tensor can be interpreted as the probability of choosing a specific topic and each column of the factor matrix corresponds to probabilities of words in the vocabulary in the corresponding topic.
References
- ^ Kruskal, J. B. (1989). "Rank, decomposition, and uniqueness for 3-way and N-way arrays". In R. Coppi & S. Bolasco (Eds.), Multiway data analysis (pp. 7–18). Amsterdam: Elsevier. [ PDF ].
- ^ Kolda, Tamara G.; Bader, Brett W. "Tensor Decompositions and Applications". SIAM Rev. 51: 455–500 (46 pages). doi:10.1137/07070111X. CiteSeerx: 10.1.1.153.2059.
- ^ a b P. Baranyi (April 2004). "TP model transformation as a way to LMI based controller design". IEEE Transaction on Industrial Electronics. 51 (2): 387–400. doi:10.1109/tie.2003.822037.
- ^ a b P. Baranyi and D. Tikk and Y. Yam and R. J. Patton (2003). "From Differential Equations to PDC Controller Design via Numerical Transformation". Computers in Industry, Elsevier Science. 51: 281–297. doi:10.1016/s0166-3615(03)00058-7.
- ^ P. Baranyi and L. Szeidl and P. Várlaki and Y. Yam (July 3–5, 2006). Definition of the HOSVD-based canonical form of polytopic dynamic models. Budapest, Hungary. pp. 660–665.
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: Unknown parameter|booktitle=
ignored (help)CS1 maint: location missing publisher (link) - ^ Ledyard R. Tucker (September 1966). "Some mathematical notes on three-mode factor analysis". Psychometrika. 31 (3): 279–311. doi:10.1007/BF02289464.
- ^ P. M. Kroonenberg (1983). "Three-mode principal component analysis: Theory and applications". DSWO Press, Leiden.
- ^ a b Lieven De Lathauwer, Bart De Moor and Joos Vandewalle (April 2000). "A multilinear Singular Value Decomposition". SIAM Journal on Matrix Analysis. 21 (4): 1253–1278.
- ^ L. Omberg, G. H. Golub and O. Alter (November 2007). "A Tensor Higher-Order Singular Value Decomposition for Integrative Analysis of DNA Microarray Data From Different Studies". PNAS. 104 (47): 18371–18376. doi:10.1073/pnas.0709146104. PMC 2147680. PMID 18003902.
- ^ L. Omberg, J. R. Meyerson, K. Kobayashi, L. S. Drury, J. F. X. Diffley and O. Alter (October 2009). "Global Effects of DNA Replication and DNA Replication Origin Activity on Eukaryotic Gene Expression". Molecular Systems Biology. 5: 312. doi:10.1038/msb.2009.70. PMC 2779084. PMID 19888207. Highlight.
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: CS1 maint: multiple names: authors list (link) - ^ C. Muralidhara, A. M. Gross, R. R. Gutell and O. Alter (April 2011). "Tensor Decomposition Reveals Concurrent Evolutionary Convergences and Divergences and Correlations with Structural Motifs in Ribosomal RNA". PLoS ONE. 6 (4): e18768. doi:10.1371/journal.pone.0018768. Highlight.
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: CS1 maint: multiple names: authors list (link) CS1 maint: unflagged free DOI (link) - ^ S. P. Ponnapalli, M. A. Saunders, C. F. Van Loan and O. Alter (December 2011). "A Higher-Order Generalized Singular Value Decomposition for Comparison of Global mRNA Expression from Multiple Organisms". PLoS ONE. 6 (12): e28072. doi:10.1371/journal.pone.0028072. Highlight.
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: CS1 maint: multiple names: authors list (link) CS1 maint: unflagged free DOI (link) - ^ Hadi Fanaee-T and João Gama (May 2015). "EigenEvent: An algorithm for event detection from complex data streams in Syndromic surveillance". Intelligent Data Analysis. 19 (3).
- ^ Haiping Lu, K.N. Plataniotis and A.N. Venetsanopoulos, "A Survey of Multilinear Subspace Learning for Tensor Data", Pattern Recognition, Vol. 44, No. 7, pp. 1540–1551, Jul. 2011.
- ^ H. Lu, K. N. Plataniotis, and A. N. Venetsanopoulos, "MPCA: Multilinear principal component analysis of tensor objects," IEEE Trans. Neural Netw., vol. 19, no. 1, pp. 18–39, Jan. 2008.
- ^ Anandkumar, Animashree; Ge, Rong; Hsu, Daniel; Kakade, Sham M; Telgarsky, Matus (2014). "Tensor decompositions for learning latent variable models". The Journal of Machine Learning Research. 15 (1): 2773–2832.